Biological Sequence Analysis

Author: Richard Durbin
Publisher: Cambridge University Press
ISBN: 9780521620413
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Presents up-to-date computer methods for analysing DNA, RNA and protein sequences.

Focus On Genome Research

Author: Clyde R. Williams
Publisher: Nova Publishers
ISBN: 9781590339602
Size: 28.96 MB
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Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs. Nucl Acids Res, 1997, 25(17):3389-402. [22] Krogh A, Brown M, Mian
IS, Sjolander K. and Haussler D. Hidden Markov models in computational biology
. Applications to protein modeling. J Mol Biol, 1994, 235(5):1501-31. [23] Durbin
R, Eddy S, Krogh A. and Mitchison G. Biological Sequence Analysis: Probabilistic
models of proteins and nucleic acids. Cambridge UK: Cambridge University
Press, ...

Problems And Solutions In Biological Sequence Analysis

Author: Mark Borodovsky
Publisher: Cambridge University Press
ISBN: 1139458124
Size: 36.36 MB
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Molecular Biology and Evolution 20, 248–254. Dowell, R. D. and Eddy, S. R. (
2004). Evaluation of several lightweight stochastic context-free grammars for
RNA secondary structure prediction. BMC Bioinformatics 5,71–85. Durbin, R.,
Eddy, S., Krogh, A., and Mitchison, G. (1998). Biological Sequence Analysis:
Probabilistic Models of Proteins and Nucleic Acids (Cambridge: Cambridge
University Press). Eddy, S. R. (1998). Profile hidden Markov models.
Bioinformatics 14, 755–763.

Pattern Recognition In Bioinformatics

Author: Tjeerd M.H. Dijkstra
Publisher: Springer
ISBN: 3642160018
Size: 31.26 MB
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13. 14. 15. 16. Rost, B., Sander, C., Schneider, R.P.: - an automatic server for
protein secondary structure prediction. Computational Applications in
Biosciences 10, 53–60 (1994) 2. Notredame, C.: Recent progresses in multiple
sequence alignment: a survey. Pharmacogenomics 3(1), 131–144 (2002) 3.
Durbin, R., Eddy, S., Krogh, A., Mitchison, G.: Biological Sequence Analysis:
Probabilistic Models of Proteins and Nucleic Acids, p. 356. Cambridge University
Press, Cambridge (1998) ...

Biological Sequence Analysis Using The Seqan C Library

Author: Andreas Gogol-Döring
Publisher: CRC Press
ISBN: 9781420076240
Size: 22.48 MB
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Sharcgs, a fast and highly accurate short-read assembly algorithm for de novo
genomic sequencing. Genome Research 17, 1697–1706. Durbin, R., E. R. Sean,
A. Krogh, and G. Mitchison (1999). Biological Sequence Analysis: Probabilistic
Models of Proteins and Nucleic Acids. Cambridge: Cambridge University Press.
Dutheil, J., S. Gaillard, E. Bazin, S. Glemin, V. Ranwez, N. Galtier, and K. Belkhir (
2006). Bio++: a set of C++ libraries for sequence analysis, phylogenetics,
molecular ...

Progress In Artificial Intelligence

Author: Carlos Bento
Publisher: Springer Science & Business Media
ISBN: 3540307370
Size: 18.19 MB
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6. Necia Grant Cooper. The Human Genome Project, Dechiphering the blueprint
of heredity, volume 1. University Science Books, 1994. 7. P. Domingos and M.
Pazzani. Beyond independence: Conditions for the optimality of the simple
bayesian classifier. In International Conference on Machine Learning, pages 105
–112, 1996. 8. E. Eskin, W. N. Grundy, and Y. Singer. Biological sequence
analysis: Probabilistic models of proteins and nucleic acids. Journal of
Computational Biology ...

Ai 2009 Advances In Artificial Intelligence

Author: Ann Nicholson
Publisher: Springer
ISBN: 3642104398
Size: 52.12 MB
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Krogh, A., Brown, M., Mian, I., Sjölander, K., Haussler, D.: Hidden markov models
in computational biology: Applications to protein modelling. Journal of Molecular
Biology 235(5), 1501–1531 (1994) 4. Durbin, R., Eddy, S., Krogh, A., Mitchison, G
.: Biological sequence analysis: probabilistic models of proteins and nucleic
acids. Cambridge University Press, Cambridge (1998) 5. Jaakkola, T., Diekhans,
M., Haussler, D.: Using the fisher kernel method to detect remote protein
homologies.

Computational Intelligence In Medical Informatics

Author: Arpad Kelemen
Publisher: Springer Science & Business Media
ISBN: 3540757678
Size: 38.74 MB
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Nucleic Acids Research (28):235–242 [3] Boeckmann B, Bairoch A, Apweiler R,
Blatter MC, Estreicher A, Gasteiger E, Martin MJ, Michoud K, O'Donovan C, Phan
I, Pilbout S, Schneider M (2003) The SWISS-PROT protein knowledgebase and
its supplement TrEMBL in 2003. Nucleic Acids Res. 31:365–370 [4] Durbin R,
Eddy S, Krogh A, Mitchison G (1998) Biological Sequence Analysis: probabilistic
models of proteins and nucleic acids. Cambridge University Press [5] Koonin EV
and ...

Pattern Recognition In Bioinformatics

Author: Tetsuo Shibuya
Publisher: Springer
ISBN: 3642341233
Size: 59.11 MB
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Notredame, C., Higgins, D.G., Heringa, J.: T-coffee: A novel method for fast and
accurate multiple sequence alignment. J. Mol. Biol. 302(1), 205–217 (2000) 3.
Subramanian, A.R., Kaufmann, A.M., Morgenstern, B.: Dialign-tx: greedy and
progressive approaches for segment-based multiple sequence alignment.
Algorithms Mol. Biol. 3, 6 (2008) 4. Durbin, R., Eddy, S.R., Krogh, A., Mitchison, G.
: Biological Sequence Analysis: Probabilistic models of proteins and nucleic
acids. Cambridge ...

Protein Structure Prediction

Author: Mohammed Zaki
Publisher: Springer Science & Business Media
ISBN: 1588297527
Size: 36.32 MB
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Predicting transmembrane protein topology with a hidden Markov model:
application to complete genomes. J Mol Biol, 305(3):567–580. 5. Needleman, S.
and Wunsch, C. (1970). A general method applicable to the search for similarities
in the amino acid sequence of two proteins. J Mol Biol, 48(3):443–453. 6. Durbin,
R., Eddy, S., Krogh, A., and Mitchison, G. (1998). Biological Sequence Analysis:
Probabilistic Models of Proteins and Nucleic Acids. Cambridge University Press.
7. Kyte ...